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  • 03 SEAFDEC/AQD External Publications
  • Journal Articles, Conference Papers and Book Chapters by SEAFDEC Staff
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The complete mitochondrial genome of freshwater gammarid Gammarus nipponensis (Crustacea: Amphipoda: Gammaridae)

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Date
2024-04-02
Author
Huervana, Joana Joy ORCID
Miyamoto, Norio ORCID
Kano, Yuichi ORCID
Onikura, Norio ORCID
Kurita, Yoshihisa
Page views
626
ASFA keyword
mitochondrial DNA ASFA
AGROVOC keyword
mitochondrial genetics AGROVOC
crustaceans AGROVOC
Taxonomic term
Gammarus nipponensis GBIF
Geographic names
Honshu TGN
Shikoku TGN
Kyūshū TGN
Japan TGN
Metadata
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Abstract
This study presents the complete mitochondrial genome sequence of Gammarus nipponensis, a freshwater crustacean found in the western regions of Honshu, Shikoku and Kyushu in Japan. The entire genome is 16,429 bp in length, encoding a standard set of 13 protein-coding genes, two ribosomal RNA genes and 22 transfer RNA genes, as well as the putative control regions. The mitochondrial genome of G. nipponensis is characterized by a high concentration of A and T nucleotides (67.1%). Notably, the mitogenome contains long TATTTTA repeats in the control region 2 at 686 bp long. This newly available genome information will be useful for studying the evolutionary relationships within the genus Gammarus and for understanding diversification among G. nipponensis populations.
Keywords
Complete mitogenome amphipods Gammaroidea phylogeny
Subjects
Mitochondrial DNA OCLC - FAST (Faceted Application of Subject Terminology) Transfer RNA OCLC - FAST (Faceted Application of Subject Terminology) Gammaridae OCLC - FAST (Faceted Application of Subject Terminology)
URI
http://hdl.handle.net/10862/6528
Suggested Citation
Huervana, J. J., Miyamoto, N., Kano, Y., Onikura, N., & Kurita, Y. (2024). The complete mitochondrial genome of freshwater gammarid Gammarus nipponensis (Crustacea: Amphipoda: Gammaridae). Mitochondrial DNA Part B, 9(4), 447-451. https://doi.org/10.1080/23802359.2024.2335990 
DOI
10.1080/23802359.2024.2335990
Type
Article
ISSN
2380-2359
Koleksi
  • Journal Articles [1266]

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