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Now showing items 11-20 of 20
Bacterial microbiota of eggs from cage-reared and tank-reared grouper, Epinephelus coioides
(European Association of Fish Pathologists, 2004)
At SEAFDEC AQD, opaque spawned grouper eggs are observed during collection in cage-reared brood stock; while opaque and multi-colored eggs are often observed in tank-reared fishes. This study aimed to investigate the ...
Effect of iodine disinfection on the bacterial flora and hatching rate of grouper, Epinephelus coioides eggs at the cleavage and eyed stages
(European Association of Fish Pathologists, 2001)
In this study, the effect of iodine disinfection on the bacterial flora and hatching rate of grouper egg at two different stages of development were investigated. The eggs (at cleavage and eyed stages) were soaked for 10 ...
Level and percentage recovery of resistance to oxytetracycline and oxolinic acid of bacteria from shrimp ponds
(Elsevier, 2002)
The bacterial level of the water, sediment and cultured shrimp (Penaeus monodon) from different ponds were determined using a general medium, a presumptive Vibrio medium and a presumptive Pseudomonas–Aeromonas medium. ...
Collection of the clam Anodontia edentula in mangrove habitats in Panay and Guimaras, central Philippines
(Kluwer Academic Publishers, 2002)
The mangrove clam Anodontia edentula is highly prized in the Philippines for its flavor and large size. Because this infaunal species is found down to one meter deep in mangrove areas, harvesting the clam reportedly damages ...
Effect of detention time on aerobic waste stabilization pond performance in Southeast Asia
(Springer Verlag, 1994)
The rising level of pollution in rivers, lakes and other bodies of water has created problems of significant magnitude in Southeast Asia. Apart from the aesthetic desirability of clean rivers are the pressing dangers to ...
Biodegradition of monochloroacetic acid by a presumptive Pseudomonas sp. strain R1 bacterium isolated from Malaysian paddy (rice) field
(Asian Network for Scientific Information, 2008)
A bacterial strain tentatively identified as Pseudomonas sp. R1 was isolated from a paddy (rice) field that could degrade monochloroacetic acid (MCA) for concentrations ranging from 5 to 40 mM. Quantitative agreement between ...
Vibrio harveyi-like bacteria associated with fin rot in farmed milkfish Chanos chanos (Forsskal) fingerlings in the Philippines
(Elsevier, 2021-03)
Milkfish (Chanos chanos) is a commercially important species widely cultured and consumed in the Philippines. It is a hardy fish but due to culture intensification, occurrence of bacterial disease is inevitable. The causative ...
Elemental sulfur in the gills of the mangrove mud clam Anodontia edentula (Family Lucinidae)
(National Shellfisheries Association, 2000)
Different sizes of the mangrove mud clam <i>Anodontia edentula</i> were collected from the mangroves in Brgy. San Roque in Estancia, Iloilo, central Philippines, and the mantle, gill, and foot tissues were analyzed for ...
Bacterial diseases of tilapia, their zoonotic potential and risk of antimicrobial resistance
(Wiley, 2023-03-05)
Tilapia culture is an important source of income and nutrition to many rural families. Since 2000, the production of tilapia increased and reached domestic and global markets. Major farmed species is Nile tilapia (Oreochromis ...
Genomic analysis of Vibrio harveyi strain PH1009, a potential multi-drug resistant pathogen due to acquisition of toxin genes
(Elsevier, 2023-03-25)
In has increasingly been observed that viral and bacterial coinfection frequently occurs among cultured shrimp and this coinfection could exacerbate the disease phenotype. Here, we describe a newly discovered bacterial strain, Vibrio harveyi PH1009 collected from Masbate Island, Philippines that was found to be co-infecting with the White Spot Syndrome virus a sample of black tiger prawn, Penaeus monodon. The genome of V. harveyi PH1009 was sequenced, assembled, and annotated. Average Nucleotide identity calculation with Vibrio harveyi strains confirmed its taxonomic identity. It is a potential multi-drug and multi-heavy metal resistant strain based on the multiple antibiotic and heavy metal resistance determinants annotated on its genome. Two prophage regions were identified in its genome. One contained genes for Zona occludens toxin (Zot) and Accessory cholera toxin (Ace), essential toxins of toxigenic V. cholerae strains apart from CTX toxins. Pan-genome analysis of V. harveyi strains, including PH1009, revealed an “open” pan-genome for V. harveyi and a core genome mainly composed of genes necessary for growth and metabolism. Phylogenetic tree based on the core genome alignment revealed that PH1009 was closest to strains QT520, CAIM 1754, and 823tez1. Published virulence factors present on the strain QT520 suggest similar pathogenicity with PH1009. However, PH1009 Zot was not found on related strains but was present in strains HENC-01 and CAIM 148. Most unique genes found in the PH1009 strain were identified as hypothetical proteins. Further annotation showed that several of these hypothetical proteins were phage transposases, integrases, and transcription regulators, implying the role of bacteriophages in the distinct genomic features of the PH1009 genome. The PH1009 genome will serve as a valuable genomic resource for comparative genomic studies and in understanding the disease mechanism of the Vibrio harveyi species....